perl-BioPerl-1.6.924-10.mga6.noarch.rpm


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Description

perl-BioPerl - BioPerl core modules

Property Value
Distribution Mageia 6.0
Repository Mageia Core x86_64
Package name perl-BioPerl
Package version 1.6.924
Package release 10.mga6
Package architecture noarch
Package type rpm
Installed size 14.68 MB
Download size 3.92 MB
Official Mirror distrib-coffee.ipsl.jussieu.fr
Officially organized in 1995 and existing informally for several years
prior, The Bioperl Project is an international association of developers
of open source Perl tools for bioinformatics, genomics and life science
research.

Alternatives

Package Version Architecture Repository
perl-BioPerl-1.6.924-10.mga6.noarch.rpm 1.6.924 noarch Mageia Core
perl-BioPerl - - -

Requires

Name Value
perl >= 0:5.008003
perl(Ace) -
perl(Algorithm::Munkres) -
perl(AnyDBM_File) -
perl(Array::Compare) -
perl(Bio::ASN1::EntrezGene) -
perl(Bio::Align::AlignI) -
perl(Bio::Align::DNAStatistics) -
perl(Bio::Align::PairwiseStatistics) -
perl(Bio::Align::StatisticsI) -
perl(Bio::AlignIO) -
perl(Bio::AlignIO::Handler::GenericAlignHandler) -
perl(Bio::AlignIO::nexml) -
perl(Bio::AnalysisParserI) -
perl(Bio::AnalysisResultI) -
perl(Bio::AnnotatableI) -
perl(Bio::Annotation::AnnotationFactory) -
perl(Bio::Annotation::Collection) -
perl(Bio::Annotation::Comment) -
perl(Bio::Annotation::DBLink) -
perl(Bio::Annotation::OntologyTerm) -
perl(Bio::Annotation::Reference) -
perl(Bio::Annotation::Relation) -
perl(Bio::Annotation::SimpleValue) -
perl(Bio::Annotation::TagTree) -
perl(Bio::Annotation::Target) -
perl(Bio::Annotation::TypeManager) -
perl(Bio::AnnotationCollectionI) -
perl(Bio::AnnotationI) -
perl(Bio::Assembly::Contig) -
perl(Bio::Assembly::IO) -
perl(Bio::Assembly::Scaffold) -
perl(Bio::Assembly::ScaffoldI) -
perl(Bio::Assembly::Singlet) -
perl(Bio::Cluster::ClusterFactory) -
perl(Bio::Cluster::FamilyI) -
perl(Bio::Cluster::SequenceFamily) -
perl(Bio::Cluster::UniGene) -
perl(Bio::Cluster::UniGeneI) -
perl(Bio::ClusterI) -
perl(Bio::ClusterIO) -
perl(Bio::CodonUsage::IO) -
perl(Bio::CodonUsage::Table) -
perl(Bio::Coordinate::Collection) -
perl(Bio::Coordinate::ExtrapolatingPair) -
perl(Bio::Coordinate::Graph) -
perl(Bio::Coordinate::MapperI) -
perl(Bio::Coordinate::Pair) -
perl(Bio::Coordinate::Result) -
perl(Bio::Coordinate::Result::Gap) -
perl(Bio::Coordinate::Result::Match) -
perl(Bio::Coordinate::ResultI) -
perl(Bio::DB::BioFetch) -
perl(Bio::DB::DBFetch) -
perl(Bio::DB::EMBL) -
perl(Bio::DB::Expression) -
perl(Bio::DB::Failover) -
perl(Bio::DB::Fasta) -
perl(Bio::DB::Flat) -
perl(Bio::DB::Flat::BDB) -
perl(Bio::DB::GFF) -
perl(Bio::DB::GFF::Adaptor::ace) -
perl(Bio::DB::GFF::Adaptor::berkeleydb::iterator) -
perl(Bio::DB::GFF::Adaptor::dbi) -
perl(Bio::DB::GFF::Adaptor::dbi::caching_handle) -
perl(Bio::DB::GFF::Adaptor::dbi::iterator) -
perl(Bio::DB::GFF::Adaptor::dbi::mysql) -
perl(Bio::DB::GFF::Adaptor::dbi::oracle) -
perl(Bio::DB::GFF::Adaptor::dbi::pg) -
perl(Bio::DB::GFF::Adaptor::memory) -
perl(Bio::DB::GFF::Adaptor::memory::feature_serializer) -
perl(Bio::DB::GFF::Adaptor::memory::iterator) -
perl(Bio::DB::GFF::Aggregator) -
perl(Bio::DB::GFF::Featname) -
perl(Bio::DB::GFF::Feature) -
perl(Bio::DB::GFF::Homol) -
perl(Bio::DB::GFF::RelSegment) -
perl(Bio::DB::GFF::Segment) -
perl(Bio::DB::GFF::Typename) -
perl(Bio::DB::GFF::Util::Binning) -
perl(Bio::DB::GFF::Util::Rearrange) -
perl(Bio::DB::GenBank) -
perl(Bio::DB::HIV::HIVAnnotProcessor) -
perl(Bio::DB::HIV::HIVQueryHelper) -
perl(Bio::DB::IndexedBase) -
perl(Bio::DB::NCBIHelper) -
perl(Bio::DB::Query::GenBank) -
perl(Bio::DB::Query::WebQuery) -
perl(Bio::DB::QueryI) -
perl(Bio::DB::RandomAccessI) -
perl(Bio::DB::RefSeq) -
perl(Bio::DB::SeqFeature) -
perl(Bio::DB::SeqFeature::NormalizedFeatureI) -
perl(Bio::DB::SeqFeature::Segment) -
perl(Bio::DB::SeqFeature::Store) -
perl(Bio::DB::SeqFeature::Store::DBI::Iterator) -
perl(Bio::DB::SeqFeature::Store::DBI::mysql) -
perl(Bio::DB::SeqFeature::Store::GFF3Loader) -
perl(Bio::DB::SeqFeature::Store::LoadHelper) -
perl(Bio::DB::SeqFeature::Store::Loader) -
perl(Bio::DB::SeqFeature::Store::berkeleydb) -
perl(Bio::DB::SeqI) -
perl(Bio::DB::SeqVersion) -
perl(Bio::DB::SwissProt) -
perl(Bio::DB::TFBS) -
perl(Bio::DB::Taxonomy) -
perl(Bio::DB::Taxonomy::list) -
perl(Bio::DB::WebDBSeqI) -
perl(Bio::DBLinkContainerI) -
perl(Bio::Das::FeatureTypeI) -
perl(Bio::Das::SegmentI) -
perl(Bio::DasI) -
perl(Bio::DescribableI) -
perl(Bio::Event::EventGeneratorI) -
perl(Bio::Event::EventHandlerI) -
perl(Bio::Factory::ApplicationFactoryI) -
perl(Bio::Factory::DriverFactory) -
perl(Bio::Factory::FTLocationFactory) -
perl(Bio::Factory::LocationFactoryI) -
perl(Bio::Factory::MapFactoryI) -
perl(Bio::Factory::ObjectBuilderI) -
perl(Bio::Factory::ObjectFactory) -
perl(Bio::Factory::ObjectFactoryI) -
perl(Bio::Factory::SeqAnalysisParserFactoryI) -
perl(Bio::Factory::SequenceFactoryI) -
perl(Bio::Factory::SequenceProcessorI) -
perl(Bio::Factory::SequenceStreamI) -
perl(Bio::Factory::TreeFactoryI) -
perl(Bio::FeatureHolderI) -
perl(Bio::HandlerBaseI) -
perl(Bio::IdentifiableI) -
perl(Bio::Index::Abstract) -
perl(Bio::Index::AbstractSeq) -
perl(Bio::LiveSeq::AARange) -
perl(Bio::LiveSeq::Chain) -
perl(Bio::LiveSeq::ChainI) -
perl(Bio::LiveSeq::DNA) -
perl(Bio::LiveSeq::Exon) -
perl(Bio::LiveSeq::Gene) -
perl(Bio::LiveSeq::IO::Loader) -
perl(Bio::LiveSeq::Intron) -
perl(Bio::LiveSeq::Mutation) -
perl(Bio::LiveSeq::Prim_Transcript) -
perl(Bio::LiveSeq::Range) -
perl(Bio::LiveSeq::Repeat_Region) -
perl(Bio::LiveSeq::Repeat_Unit) -
perl(Bio::LiveSeq::SeqI) -
perl(Bio::LiveSeq::Transcript) -
perl(Bio::LiveSeq::Translation) -
perl(Bio::LocatableSeq) -
perl(Bio::Location::Atomic) -
perl(Bio::Location::CoordinatePolicyI) -
perl(Bio::Location::Fuzzy) -
perl(Bio::Location::FuzzyLocationI) -
perl(Bio::Location::Simple) -
perl(Bio::Location::Split) -
perl(Bio::Location::SplitLocationI) -
perl(Bio::Location::WidestCoordPolicy) -
perl(Bio::LocationI) -
perl(Bio::Map::Clone) -
perl(Bio::Map::Contig) -
perl(Bio::Map::CytoPosition) -
perl(Bio::Map::EntityI) -
perl(Bio::Map::FPCMarker) -
perl(Bio::Map::Gene) -
perl(Bio::Map::GeneMap) -
perl(Bio::Map::GenePosition) -
perl(Bio::Map::GeneRelative) -
perl(Bio::Map::LinkagePosition) -
perl(Bio::Map::MapI) -
perl(Bio::Map::Mappable) -
perl(Bio::Map::MappableI) -
perl(Bio::Map::Marker) -
perl(Bio::Map::MarkerI) -
perl(Bio::Map::OrderedPosition) -
perl(Bio::Map::Physical) -
perl(Bio::Map::Position) -
perl(Bio::Map::PositionHandler) -
perl(Bio::Map::PositionHandlerI) -
perl(Bio::Map::PositionI) -
perl(Bio::Map::PositionWithSequence) -
perl(Bio::Map::Relative) -
perl(Bio::Map::RelativeI) -
perl(Bio::Map::SimpleMap) -
perl(Bio::Map::TranscriptionFactor) -
perl(Bio::MapIO) -
perl(Bio::Matrix::Generic) -
perl(Bio::Matrix::IO) -
perl(Bio::Matrix::MatrixI) -
perl(Bio::Matrix::Mlagan) -
perl(Bio::Matrix::PSM::IO) -
perl(Bio::Matrix::PSM::InstanceSite) -
perl(Bio::Matrix::PSM::InstanceSiteI) -
perl(Bio::Matrix::PSM::ProtMatrix) -
perl(Bio::Matrix::PSM::Psm) -
perl(Bio::Matrix::PSM::PsmHeader) -
perl(Bio::Matrix::PSM::PsmHeaderI) -
perl(Bio::Matrix::PSM::PsmI) -
perl(Bio::Matrix::PSM::SiteMatrix) -
perl(Bio::Matrix::PSM::SiteMatrixI) -
perl(Bio::Matrix::PhylipDist) -
perl(Bio::Matrix::Scoring) -
perl(Bio::MolEvol::CodonModel) -
perl(Bio::Nexml::Factory) -
perl(Bio::Ontology::DocumentRegistry) -
perl(Bio::Ontology::OBOEngine) -
perl(Bio::Ontology::Ontology) -
perl(Bio::Ontology::OntologyEngineI) -
perl(Bio::Ontology::OntologyI) -
perl(Bio::Ontology::OntologyStore) -
perl(Bio::Ontology::PathI) -
perl(Bio::Ontology::Relationship) -
perl(Bio::Ontology::RelationshipFactory) -
perl(Bio::Ontology::RelationshipI) -
perl(Bio::Ontology::RelationshipType) -
perl(Bio::Ontology::SimpleGOEngine::GraphAdaptor) -
perl(Bio::Ontology::SimpleOntologyEngine) -
perl(Bio::Ontology::Term) -
perl(Bio::Ontology::TermFactory) -
perl(Bio::Ontology::TermI) -
perl(Bio::OntologyIO) -
perl(Bio::OntologyIO::Handlers::BaseSAXHandler) -
perl(Bio::OntologyIO::Handlers::InterProHandler) -
perl(Bio::OntologyIO::dagflat) -
perl(Bio::ParameterBaseI) -
perl(Bio::Phenotype::Correlate) -
perl(Bio::Phenotype::MeSH::Term) -
perl(Bio::Phenotype::MeSH::Twig) -
perl(Bio::Phenotype::Measure) -
perl(Bio::Phenotype::OMIM::MiniMIMentry) -
perl(Bio::Phenotype::OMIM::OMIMentry) -
perl(Bio::Phenotype::OMIM::OMIMentryAllelicVariant) -
perl(Bio::Phenotype::Phenotype) -
perl(Bio::Phenotype::PhenotypeI) -
perl(Bio::Phylo::Factory) -
perl(Bio::Phylo::Forest::Tree) -
perl(Bio::Phylo::IO) -
perl(Bio::Phylo::Matrices) -
perl(Bio::Phylo::Matrices::Datum) -
perl(Bio::Phylo::Matrices::Matrix) -
perl(Bio::PhyloNetwork) -
perl(Bio::PhyloNetwork::TreeFactory) -
perl(Bio::PhyloNetwork::TreeFactoryX) -
perl(Bio::PhyloNetwork::muVector) -
perl(Bio::PopGen::Genotype) -
perl(Bio::PopGen::GenotypeI) -
perl(Bio::PopGen::IO) -
perl(Bio::PopGen::Individual) -
perl(Bio::PopGen::IndividualI) -
perl(Bio::PopGen::Marker) -
perl(Bio::PopGen::MarkerI) -
perl(Bio::PopGen::Population) -
perl(Bio::PopGen::PopulationI) -
perl(Bio::PrimarySeq) -
perl(Bio::PrimarySeqI) -
perl(Bio::PullParserI) -
perl(Bio::Range) -
perl(Bio::RangeI) -
perl(Bio::Restriction::Enzyme) -
perl(Bio::Restriction::Enzyme::MultiCut) -
perl(Bio::Restriction::Enzyme::MultiSite) -
perl(Bio::Restriction::EnzymeCollection) -
perl(Bio::Restriction::EnzymeI) -
perl(Bio::Restriction::IO) -
perl(Bio::Restriction::IO::base) -
perl(Bio::Root::Exception) -
perl(Bio::Root::HTTPget) -
perl(Bio::Root::IO) -
perl(Bio::Root::Root) -
perl(Bio::Root::RootI) -
perl(Bio::Root::Version) -
perl(Bio::Search::BlastStatistics) -
perl(Bio::Search::BlastUtils) -
perl(Bio::Search::DatabaseI) -
perl(Bio::Search::GenericStatistics) -
perl(Bio::Search::HSP::BlastPullHSP) -
perl(Bio::Search::HSP::GenericHSP) -
perl(Bio::Search::HSP::HSPFactory) -
perl(Bio::Search::HSP::HSPI) -
perl(Bio::Search::HSP::HmmpfamHSP) -
perl(Bio::Search::HSP::PullHSPI) -
perl(Bio::Search::Hit::BlastPullHit) -
perl(Bio::Search::Hit::GenericHit) -
perl(Bio::Search::Hit::HitFactory) -
perl(Bio::Search::Hit::HitI) -
perl(Bio::Search::Hit::HmmpfamHit) -
perl(Bio::Search::Hit::PullHitI) -
perl(Bio::Search::Iteration::IterationI) -
perl(Bio::Search::Result::BlastPullResult) -
perl(Bio::Search::Result::CrossMatchResult) -
perl(Bio::Search::Result::GenericResult) -
perl(Bio::Search::Result::HmmpfamResult) -
perl(Bio::Search::Result::PullResultI) -
perl(Bio::Search::Result::ResultFactory) -
perl(Bio::Search::Result::ResultI) -
perl(Bio::Search::SearchUtils) -
perl(Bio::Search::StatisticsI) -
perl(Bio::Search::Tiling::MapTileUtils) -
perl(Bio::Search::Tiling::TilingI) -
perl(Bio::SearchIO) -
perl(Bio::SearchIO::EventHandlerI) -
perl(Bio::SearchIO::IteratedSearchResultEventBuilder) -
perl(Bio::SearchIO::SearchResultEventBuilder) -
perl(Bio::SearchIO::SearchWriterI) -
perl(Bio::SearchIO::Writer::ResultTableWriter) -
perl(Bio::SearchIO::XML::BlastHandler) -
perl(Bio::SearchIO::hmmer) -
perl(Bio::Seq) -
perl(Bio::Seq::LargeLocatableSeq) -
perl(Bio::Seq::LargePrimarySeq) -
perl(Bio::Seq::LargeSeqI) -
perl(Bio::Seq::Meta) -
perl(Bio::Seq::Meta::Array) -
perl(Bio::Seq::MetaI) -
perl(Bio::Seq::PrimaryQual) -
perl(Bio::Seq::PrimedSeq) -
perl(Bio::Seq::QualI) -
perl(Bio::Seq::Quality) -
perl(Bio::Seq::RichSeq) -
perl(Bio::Seq::RichSeqI) -
perl(Bio::Seq::SeqBuilder) -
perl(Bio::Seq::SeqFactory) -
perl(Bio::Seq::SeqFastaSpeedFactory) -
perl(Bio::Seq::SequenceTrace) -
perl(Bio::Seq::TraceI) -
perl(Bio::SeqAnalysisParserI) -
perl(Bio::SeqEvolution::EvolutionI) -
perl(Bio::SeqEvolution::Factory) -
perl(Bio::SeqFeature::Amplicon) -
perl(Bio::SeqFeature::Annotated) -
perl(Bio::SeqFeature::Collection) -
perl(Bio::SeqFeature::CollectionI) -
perl(Bio::SeqFeature::FeaturePair) -
perl(Bio::SeqFeature::Gene::Exon) -
perl(Bio::SeqFeature::Gene::ExonI) -
perl(Bio::SeqFeature::Gene::GeneStructure) -
perl(Bio::SeqFeature::Gene::GeneStructureI) -
perl(Bio::SeqFeature::Gene::Intron) -
perl(Bio::SeqFeature::Gene::NC_Feature) -
perl(Bio::SeqFeature::Gene::Transcript) -
perl(Bio::SeqFeature::Gene::TranscriptI) -
perl(Bio::SeqFeature::Generic) -
perl(Bio::SeqFeature::Lite) -
perl(Bio::SeqFeature::Primer) -
perl(Bio::SeqFeature::SiRNA::Oligo) -
perl(Bio::SeqFeature::SiRNA::Pair) -
perl(Bio::SeqFeature::Similarity) -
perl(Bio::SeqFeature::SimilarityPair) -
perl(Bio::SeqFeature::SubSeq) -
perl(Bio::SeqFeature::Tools::FeatureNamer) -
perl(Bio::SeqFeature::Tools::IDHandler) -
perl(Bio::SeqFeature::Tools::TypeMapper) -
perl(Bio::SeqFeature::Tools::Unflattener) -
perl(Bio::SeqFeatureI) -
perl(Bio::SeqI) -
perl(Bio::SeqIO) -
perl(Bio::SeqIO::FTHelper) -
perl(Bio::SeqIO::Handler::GenericRichSeqHandler) -
perl(Bio::SeqIO::MultiFile) -
perl(Bio::SeqIO::chadoxml) -
perl(Bio::SeqIO::chaos) -
perl(Bio::SeqIO::game::featHandler) -
perl(Bio::SeqIO::game::gameHandler) -
perl(Bio::SeqIO::game::gameSubs) -
perl(Bio::SeqIO::game::gameWriter) -
perl(Bio::SeqIO::game::seqHandler) -
perl(Bio::SeqIO::gcg) -
perl(Bio::SeqIO::nexml) -
perl(Bio::SeqIO::table) -
perl(Bio::SeqIO::tinyseq::tinyseqHandler) -
perl(Bio::SeqUtils) -
perl(Bio::SimpleAlign) -
perl(Bio::SimpleAnalysisI) -
perl(Bio::Species) -
perl(Bio::Structure::Atom) -
perl(Bio::Structure::Chain) -
perl(Bio::Structure::Entry) -
perl(Bio::Structure::IO) -
perl(Bio::Structure::Model) -
perl(Bio::Structure::Residue) -
perl(Bio::Structure::StructureI) -
perl(Bio::Symbol::Alphabet) -
perl(Bio::Symbol::AlphabetI) -
perl(Bio::Symbol::Symbol) -
perl(Bio::Symbol::SymbolI) -
perl(Bio::Taxon) -
perl(Bio::Taxonomy::Taxon) -
perl(Bio::Tools::AlignFactory) -
perl(Bio::Tools::Alignment::Trim) -
perl(Bio::Tools::Analysis::SimpleAnalysisBase) -
perl(Bio::Tools::AnalysisResult) -
perl(Bio::Tools::CodonTable) -
perl(Bio::Tools::GFF) -
perl(Bio::Tools::Genewise) -
perl(Bio::Tools::Genomewise) -
perl(Bio::Tools::GuessSeqFormat) -
perl(Bio::Tools::HMMER::Domain) -
perl(Bio::Tools::HMMER::Set) -
perl(Bio::Tools::IUPAC) -
perl(Bio::Tools::Phylo::Molphy::Result) -
perl(Bio::Tools::Phylo::PAML::ModelResult) -
perl(Bio::Tools::Phylo::PAML::Result) -
perl(Bio::Tools::Prediction::Exon) -
perl(Bio::Tools::Prediction::Gene) -
perl(Bio::Tools::RandomDistFunctions) -
perl(Bio::Tools::Run::GenericParameters) -
perl(Bio::Tools::Run::ParametersI) -
perl(Bio::Tools::Run::Samtools) -
perl(Bio::Tools::Run::StandAloneBlast) -
perl(Bio::Tools::Run::WrapperBase) -
perl(Bio::Tools::SeqPattern) -
perl(Bio::Tools::SeqStats) -
perl(Bio::Tools::SiRNA) -
perl(Bio::Tools::Signalp) -
perl(Bio::Tools::Sim4::Exon) -
perl(Bio::Tools::Spidey::Exon) -
perl(Bio::Tree::AlleleNode) -
perl(Bio::Tree::AnnotatableNode) -
perl(Bio::Tree::Node) -
perl(Bio::Tree::NodeI) -
perl(Bio::Tree::NodeNHX) -
perl(Bio::Tree::RandomFactory) -
perl(Bio::Tree::Tree) -
perl(Bio::Tree::TreeFunctionsI) -
perl(Bio::Tree::TreeI) -
perl(Bio::TreeIO) -
perl(Bio::TreeIO::NewickParser) -
perl(Bio::TreeIO::TreeEventBuilder) -
perl(Bio::TreeIO::newick) -
perl(Bio::TreeIO::nexml) -
perl(Bio::Variation::AAChange) -
perl(Bio::Variation::Allele) -
perl(Bio::Variation::DNAMutation) -
perl(Bio::Variation::IO) -
perl(Bio::Variation::RNAChange) -
perl(Bio::Variation::SNP) -
perl(Bio::Variation::SeqDiff) -
perl(Bio::Variation::VariantI) -
perl(Bio::WebAgent) -
perl(CGI) -
perl(Carp) -
perl(Convert::Binary::C) -
perl(Cwd) -
perl(DBD::Pg) -
perl(DBI) -
perl(DB_File) -
perl(Data::Dumper) -
perl(Data::Stag) -
perl(Data::Stag::XMLWriter) -
perl(Dumpvalue) -
perl(Encode) -
perl(English) -
perl(Error) -
perl(Exporter) -
perl(Fcntl) -
perl(File::Basename) -
perl(File::Copy) -
perl(File::Glob) -
perl(File::Path) -
perl(File::Spec) -
perl(File::Spec::Functions) -
perl(File::Temp) -
perl(FileHandle) -
perl(GD) -
perl(GD::Simple) -
perl(Graph::Directed) -
perl(GraphViz) -
perl(HTML::HeadParser) -
perl(HTML::TableExtract) -
perl(HTTP::Request::Common) -
perl(HTTP::Response) -
perl(IO::File) -
perl(IO::Handle) -
perl(IO::Pipe) -
perl(IO::Socket) -
perl(IO::String) -
perl(IPC::Run) -
perl(LWP) >= 5.640.0
perl(LWP::UserAgent) -
perl(List::MoreUtils) -
perl(List::Util) -
perl(MIME::Base64) -
perl(Memoize) -
perl(POSIX) -
perl(PostScript::TextBlock) -
perl(SVG) >= 2.260.0
perl(SVG::Graph) -
perl(SVG::Graph::Data) -
perl(SVG::Graph::Data::Node) -
perl(SVG::Graph::Data::Tree) -
perl(Scalar::Util) -
perl(Set::Scalar) -
perl(Spreadsheet::ParseExcel) -
perl(Storable) -
perl(Symbol) -
perl(Test::Builder) -
perl(Test::Builder::Module) -
perl(Test::Most) -
perl(Text::Balanced) -
perl(Text::ParseWords) -
perl(Text::Wrap) -
perl(Tie::Handle) -
perl(Tie::RefHash) -
perl(Time::HiRes) -
perl(Time::Local) -
perl(Tree::DAG_Node) -
perl(UNIVERSAL) -
perl(URI) -
perl(URI::Escape) -
perl(XML::DOM) -
perl(XML::DOM::XPath) -
perl(XML::LibXML) -
perl(XML::LibXML::Reader) -
perl(XML::Parser::PerlSAX) -
perl(XML::SAX) -
perl(XML::SAX::Base) -
perl(XML::SAX::Writer) -
perl(XML::Simple) -
perl(XML::Twig) -
perl(XML::Writer) >= 0.400.0
perl(base) -
perl(constant) -
perl(integer) -
perl(lib) -
perl(overload) -
perl(parent) -
perl(strict) -
perl(utf8) -
perl(vars) -
perl(version) -
perl(warnings) -
perl-base >= 2:5.22.2

Provides

Name Value
perl(Bio::Align::AlignI) -
perl(Bio::Align::DNAStatistics) -
perl(Bio::Align::Graphics) -
perl(Bio::Align::PairwiseStatistics) -
perl(Bio::Align::ProteinStatistics) -
perl(Bio::Align::StatisticsI) -
perl(Bio::Align::Utilities) -
perl(Bio::AlignIO) -
perl(Bio::AlignIO::Handler::GenericAlignHandler) -
perl(Bio::AlignIO::arp) -
perl(Bio::AlignIO::bl2seq) -
perl(Bio::AlignIO::clustalw) -
perl(Bio::AlignIO::emboss) -
perl(Bio::AlignIO::fasta) -
perl(Bio::AlignIO::largemultifasta) -
perl(Bio::AlignIO::maf) -
perl(Bio::AlignIO::mase) -
perl(Bio::AlignIO::mega) -
perl(Bio::AlignIO::meme) -
perl(Bio::AlignIO::metafasta) -
perl(Bio::AlignIO::msf) -
perl(Bio::AlignIO::nexml) -
perl(Bio::AlignIO::nexus) -
perl(Bio::AlignIO::pfam) -
perl(Bio::AlignIO::phylip) -
perl(Bio::AlignIO::po) -
perl(Bio::AlignIO::proda) -
perl(Bio::AlignIO::prodom) -
perl(Bio::AlignIO::psi) -
perl(Bio::AlignIO::selex) -
perl(Bio::AlignIO::stockholm) -
perl(Bio::AlignIO::xmfa) -
perl(Bio::AnalysisI) -
perl(Bio::AnalysisI::JobI) -
perl(Bio::AnalysisParserI) -
perl(Bio::AnalysisResultI) -
perl(Bio::AnnotatableI) -
perl(Bio::Annotation::AnnotationFactory) -
perl(Bio::Annotation::Collection) -
perl(Bio::Annotation::Comment) -
perl(Bio::Annotation::DBLink) -
perl(Bio::Annotation::OntologyTerm) -
perl(Bio::Annotation::Reference) -
perl(Bio::Annotation::Relation) -
perl(Bio::Annotation::SimpleValue) -
perl(Bio::Annotation::StructuredValue) -
perl(Bio::Annotation::TagTree) -
perl(Bio::Annotation::Target) -
perl(Bio::Annotation::Tree) -
perl(Bio::Annotation::TypeManager) -
perl(Bio::AnnotationCollectionI) -
perl(Bio::AnnotationI) -
perl(Bio::Assembly::Contig) -
perl(Bio::Assembly::ContigAnalysis) -
perl(Bio::Assembly::IO) -
perl(Bio::Assembly::IO::ace) -
perl(Bio::Assembly::IO::bowtie) -
perl(Bio::Assembly::IO::maq) -
perl(Bio::Assembly::IO::phrap) -
perl(Bio::Assembly::IO::sam) -
perl(Bio::Assembly::IO::tigr) -
perl(Bio::Assembly::Scaffold) -
perl(Bio::Assembly::ScaffoldI) -
perl(Bio::Assembly::Singlet) -
perl(Bio::Assembly::Tools::ContigSpectrum) -
perl(Bio::Cluster::ClusterFactory) -
perl(Bio::Cluster::FamilyI) -
perl(Bio::Cluster::SequenceFamily) -
perl(Bio::Cluster::UniGene) -
perl(Bio::Cluster::UniGeneI) -
perl(Bio::ClusterI) -
perl(Bio::ClusterIO) -
perl(Bio::ClusterIO::dbsnp) -
perl(Bio::ClusterIO::unigene) -
perl(Bio::CodonUsage::IO) -
perl(Bio::CodonUsage::Table) -
perl(Bio::Coordinate::Chain) -
perl(Bio::Coordinate::Collection) -
perl(Bio::Coordinate::ExtrapolatingPair) -
perl(Bio::Coordinate::GeneMapper) -
perl(Bio::Coordinate::Graph) -
perl(Bio::Coordinate::MapperI) -
perl(Bio::Coordinate::Pair) -
perl(Bio::Coordinate::Result) -
perl(Bio::Coordinate::Result::Gap) -
perl(Bio::Coordinate::Result::Match) -
perl(Bio::Coordinate::ResultI) -
perl(Bio::Coordinate::Utils) -
perl(Bio::DB::Ace) -
perl(Bio::DB::BioFetch) -
perl(Bio::DB::CUTG) -
perl(Bio::DB::DBFetch) -
perl(Bio::DB::EMBL) -
perl(Bio::DB::EntrezGene) -
perl(Bio::DB::Expression) -
perl(Bio::DB::Expression::geo) -
perl(Bio::DB::Failover) -
perl(Bio::DB::Fasta) -
perl(Bio::DB::Fasta::Subdir) -
perl(Bio::DB::FileCache) -
perl(Bio::DB::Flat) -
perl(Bio::DB::Flat::BDB) -
perl(Bio::DB::Flat::BDB::embl) -
perl(Bio::DB::Flat::BDB::fasta) -
perl(Bio::DB::Flat::BDB::genbank) -
perl(Bio::DB::Flat::BDB::swiss) -
perl(Bio::DB::Flat::BinarySearch) -
perl(Bio::DB::GFF) -
perl(Bio::DB::GFF::Adaptor::ace) -
perl(Bio::DB::GFF::Adaptor::berkeleydb) -
perl(Bio::DB::GFF::Adaptor::berkeleydb::iterator) -
perl(Bio::DB::GFF::Adaptor::biofetch) -
perl(Bio::DB::GFF::Adaptor::biofetch_oracle) -
perl(Bio::DB::GFF::Adaptor::dbi) -
perl(Bio::DB::GFF::Adaptor::dbi::caching_handle) -
perl(Bio::DB::GFF::Adaptor::dbi::faux_dbh) -
perl(Bio::DB::GFF::Adaptor::dbi::iterator) -
perl(Bio::DB::GFF::Adaptor::dbi::mysql) -
perl(Bio::DB::GFF::Adaptor::dbi::mysqlace) -
perl(Bio::DB::GFF::Adaptor::dbi::mysqlcmap) -
perl(Bio::DB::GFF::Adaptor::dbi::mysqlopt) -
perl(Bio::DB::GFF::Adaptor::dbi::oracle) -
perl(Bio::DB::GFF::Adaptor::dbi::oracleace) -
perl(Bio::DB::GFF::Adaptor::dbi::pg) -
perl(Bio::DB::GFF::Adaptor::dbi::pg_fts) -
perl(Bio::DB::GFF::Adaptor::memory) -
perl(Bio::DB::GFF::Adaptor::memory::feature_serializer) -
perl(Bio::DB::GFF::Adaptor::memory::iterator) -
perl(Bio::DB::GFF::Aggregator) -
perl(Bio::DB::GFF::Aggregator::alignment) -
perl(Bio::DB::GFF::Aggregator::clone) -
perl(Bio::DB::GFF::Aggregator::coding) -
perl(Bio::DB::GFF::Aggregator::gene) -
perl(Bio::DB::GFF::Aggregator::match) -
perl(Bio::DB::GFF::Aggregator::none) -
perl(Bio::DB::GFF::Aggregator::orf) -
perl(Bio::DB::GFF::Aggregator::processed_transcript) -
perl(Bio::DB::GFF::Aggregator::so_transcript) -
perl(Bio::DB::GFF::Aggregator::transcript) -
perl(Bio::DB::GFF::Aggregator::ucsc_acembly) -
perl(Bio::DB::GFF::Aggregator::ucsc_ensgene) -
perl(Bio::DB::GFF::Aggregator::ucsc_genscan) -
perl(Bio::DB::GFF::Aggregator::ucsc_refgene) -
perl(Bio::DB::GFF::Aggregator::ucsc_sanger22) -
perl(Bio::DB::GFF::Aggregator::ucsc_sanger22pseudo) -
perl(Bio::DB::GFF::Aggregator::ucsc_softberry) -
perl(Bio::DB::GFF::Aggregator::ucsc_twinscan) -
perl(Bio::DB::GFF::Aggregator::ucsc_unigene) -
perl(Bio::DB::GFF::Featname) -
perl(Bio::DB::GFF::Feature) -
perl(Bio::DB::GFF::FeatureIterator) -
perl(Bio::DB::GFF::Homol) -
perl(Bio::DB::GFF::ID_Iterator) -
perl(Bio::DB::GFF::RelSegment) -
perl(Bio::DB::GFF::Segment) -
perl(Bio::DB::GFF::Typename) -
perl(Bio::DB::GFF::Util::Binning) -
perl(Bio::DB::GFF::Util::Rearrange) -
perl(Bio::DB::GenBank) -
perl(Bio::DB::GenPept) -
perl(Bio::DB::GenericWebAgent) -
perl(Bio::DB::HIV) -
perl(Bio::DB::HIV::HIVAnnotProcessor) -
perl(Bio::DB::HIV::HIVQueryHelper) -
perl(Bio::DB::InMemoryCache) -
perl(Bio::DB::Indexed::Stream) -
perl(Bio::DB::IndexedBase) -
perl(Bio::DB::LocationI) -
perl(Bio::DB::MeSH) -
perl(Bio::DB::NCBIHelper) -
perl(Bio::DB::Qual) -
perl(Bio::DB::Query::GenBank) -
perl(Bio::DB::Query::HIVQuery) -
perl(Bio::DB::Query::WebQuery) -
perl(Bio::DB::QueryI) -
perl(Bio::DB::RandomAccessI) -
perl(Bio::DB::RefSeq) -
perl(Bio::DB::ReferenceI) -
perl(Bio::DB::Registry) -
perl(Bio::DB::SeqFeature) -
perl(Bio::DB::SeqFeature::NormalizedFeature) -
perl(Bio::DB::SeqFeature::NormalizedFeatureI) -
perl(Bio::DB::SeqFeature::NormalizedTableFeatureI) -
perl(Bio::DB::SeqFeature::Segment) -
perl(Bio::DB::SeqFeature::Store) -
perl(Bio::DB::SeqFeature::Store::DBI::Iterator) -
perl(Bio::DB::SeqFeature::Store::DBI::Pg) -
perl(Bio::DB::SeqFeature::Store::DBI::SQLite) -
perl(Bio::DB::SeqFeature::Store::DBI::mysql) -
perl(Bio::DB::SeqFeature::Store::FeatureFileLoader) -
perl(Bio::DB::SeqFeature::Store::FeatureIterator) -
perl(Bio::DB::SeqFeature::Store::GFF2Loader) -
perl(Bio::DB::SeqFeature::Store::GFF3Loader) -
perl(Bio::DB::SeqFeature::Store::LoadHelper) == 1.100.0
perl(Bio::DB::SeqFeature::Store::Loader) -
perl(Bio::DB::SeqFeature::Store::bdb) -
perl(Bio::DB::SeqFeature::Store::berkeleydb) -
perl(Bio::DB::SeqFeature::Store::berkeleydb3) -
perl(Bio::DB::SeqFeature::Store::berkeleydb::Iterator) -
perl(Bio::DB::SeqFeature::Store::memory) -
perl(Bio::DB::SeqFeature::Store::memory::Iterator) -
perl(Bio::DB::SeqHound) -
perl(Bio::DB::SeqI) -
perl(Bio::DB::SeqVersion) -
perl(Bio::DB::SeqVersion::gi) -
perl(Bio::DB::SwissProt) -
perl(Bio::DB::TFBS) -
perl(Bio::DB::TFBS::transfac_pro) -
perl(Bio::DB::Taxonomy) -
perl(Bio::DB::Taxonomy::entrez) -
perl(Bio::DB::Taxonomy::flatfile) -
perl(Bio::DB::Taxonomy::greengenes) -
perl(Bio::DB::Taxonomy::list) -
perl(Bio::DB::Taxonomy::silva) -
perl(Bio::DB::Universal) -
perl(Bio::DB::UpdateableSeqI) -
perl(Bio::DB::WebDBSeqI) -
perl(Bio::DBLinkContainerI) -
perl(Bio::Das::FeatureTypeI) -
perl(Bio::Das::SegmentI) -
perl(Bio::DasI) -
perl(Bio::DescribableI) -
perl(Bio::Draw::Pictogram) -
perl(Bio::Event::EventGeneratorI) -
perl(Bio::Event::EventHandlerI) -
perl(Bio::Factory::AnalysisI) -
perl(Bio::Factory::ApplicationFactoryI) -
perl(Bio::Factory::DriverFactory) -
perl(Bio::Factory::FTLocationFactory) -
perl(Bio::Factory::LocationFactoryI) -
perl(Bio::Factory::MapFactoryI) -
perl(Bio::Factory::ObjectBuilderI) -
perl(Bio::Factory::ObjectFactory) -
perl(Bio::Factory::ObjectFactoryI) -
perl(Bio::Factory::SeqAnalysisParserFactory) -
perl(Bio::Factory::SeqAnalysisParserFactoryI) -
perl(Bio::Factory::SequenceFactoryI) -
perl(Bio::Factory::SequenceProcessorI) -
perl(Bio::Factory::SequenceStreamI) -
perl(Bio::Factory::TreeFactoryI) -
perl(Bio::FeatureHolderI) -
perl(Bio::HandlerBaseI) -
perl(Bio::IdCollectionI) -
perl(Bio::IdentifiableI) -
perl(Bio::Index::Abstract) -
perl(Bio::Index::AbstractSeq) -
perl(Bio::Index::Blast) -
perl(Bio::Index::BlastTable) -
perl(Bio::Index::EMBL) -
perl(Bio::Index::Fasta) -
perl(Bio::Index::Fastq) -
perl(Bio::Index::GenBank) -
perl(Bio::Index::Hmmer) -
perl(Bio::Index::Qual) -
perl(Bio::Index::Stockholm) -
perl(Bio::Index::SwissPfam) -
perl(Bio::Index::Swissprot) -
perl(Bio::LiveSeq::AARange) -
perl(Bio::LiveSeq::Chain) -
perl(Bio::LiveSeq::ChainI) -
perl(Bio::LiveSeq::DNA) -
perl(Bio::LiveSeq::Exon) -
perl(Bio::LiveSeq::Gene) -
perl(Bio::LiveSeq::IO::BioPerl) -
perl(Bio::LiveSeq::IO::Loader) -
perl(Bio::LiveSeq::Intron) -
perl(Bio::LiveSeq::Mutation) -
perl(Bio::LiveSeq::Mutator) -
perl(Bio::LiveSeq::Prim_Transcript) -
perl(Bio::LiveSeq::Range) -
perl(Bio::LiveSeq::Repeat_Region) -
perl(Bio::LiveSeq::Repeat_Unit) -
perl(Bio::LiveSeq::SeqI) -
perl(Bio::LiveSeq::Transcript) -
perl(Bio::LiveSeq::Translation) -
perl(Bio::LocatableSeq) -
perl(Bio::Location::Atomic) -
perl(Bio::Location::AvWithinCoordPolicy) -
perl(Bio::Location::CoordinatePolicyI) -
perl(Bio::Location::Fuzzy) -
perl(Bio::Location::FuzzyLocationI) -
perl(Bio::Location::NarrowestCoordPolicy) -
perl(Bio::Location::Simple) -
perl(Bio::Location::Split) -
perl(Bio::Location::SplitLocationI) -
perl(Bio::Location::WidestCoordPolicy) -
perl(Bio::LocationI) -
perl(Bio::Map::Clone) -
perl(Bio::Map::Contig) -
perl(Bio::Map::CytoMap) -
perl(Bio::Map::CytoMarker) -
perl(Bio::Map::CytoPosition) -
perl(Bio::Map::EntityI) -
perl(Bio::Map::FPCMarker) -
perl(Bio::Map::Gene) -
perl(Bio::Map::GeneMap) -
perl(Bio::Map::GenePosition) -
perl(Bio::Map::GeneRelative) -
perl(Bio::Map::LinkageMap) -
perl(Bio::Map::LinkagePosition) -
perl(Bio::Map::MapI) -
perl(Bio::Map::Mappable) -
perl(Bio::Map::MappableI) -
perl(Bio::Map::Marker) -
perl(Bio::Map::MarkerI) -
perl(Bio::Map::Microsatellite) -
perl(Bio::Map::OrderedPosition) -
perl(Bio::Map::OrderedPositionWithDistance) -
perl(Bio::Map::Physical) -
perl(Bio::Map::Position) -
perl(Bio::Map::PositionHandler) -
perl(Bio::Map::PositionHandlerI) -
perl(Bio::Map::PositionI) -
perl(Bio::Map::PositionWithSequence) -
perl(Bio::Map::Prediction) -
perl(Bio::Map::Relative) -
perl(Bio::Map::RelativeI) -
perl(Bio::Map::SimpleMap) -
perl(Bio::Map::TranscriptionFactor) -
perl(Bio::MapIO) -
perl(Bio::MapIO::fpc) -
perl(Bio::MapIO::mapmaker) -
perl(Bio::Matrix::Generic) -
perl(Bio::Matrix::IO) -
perl(Bio::Matrix::IO::mlagan) -
perl(Bio::Matrix::IO::phylip) -
perl(Bio::Matrix::IO::scoring) -
perl(Bio::Matrix::MatrixI) -
perl(Bio::Matrix::Mlagan) -
perl(Bio::Matrix::PSM::IO) -
perl(Bio::Matrix::PSM::IO::mast) -
perl(Bio::Matrix::PSM::IO::masta) -
perl(Bio::Matrix::PSM::IO::meme) -
perl(Bio::Matrix::PSM::IO::psiblast) -
perl(Bio::Matrix::PSM::IO::transfac) -
perl(Bio::Matrix::PSM::InstanceSite) -
perl(Bio::Matrix::PSM::InstanceSiteI) -
perl(Bio::Matrix::PSM::ProtMatrix) -
perl(Bio::Matrix::PSM::ProtPsm) -
perl(Bio::Matrix::PSM::Psm) -
perl(Bio::Matrix::PSM::PsmHeader) -
perl(Bio::Matrix::PSM::PsmHeaderI) -
perl(Bio::Matrix::PSM::PsmI) -
perl(Bio::Matrix::PSM::SiteMatrix) -
perl(Bio::Matrix::PSM::SiteMatrixI) -
perl(Bio::Matrix::PhylipDist) -
perl(Bio::Matrix::Scoring) -
perl(Bio::MolEvol::CodonModel) -
perl(Bio::Nexml::Factory) -
perl(Bio::NexmlIO) -
perl(Bio::Ontology::DocumentRegistry) -
perl(Bio::Ontology::GOterm) -
perl(Bio::Ontology::InterProTerm) -
perl(Bio::Ontology::OBOEngine) -
perl(Bio::Ontology::OBOterm) -
perl(Bio::Ontology::Ontology) -
perl(Bio::Ontology::OntologyEngineI) -
perl(Bio::Ontology::OntologyI) -
perl(Bio::Ontology::OntologyStore) -
perl(Bio::Ontology::Path) -
perl(Bio::Ontology::PathI) -
perl(Bio::Ontology::Relationship) -
perl(Bio::Ontology::RelationshipFactory) -
perl(Bio::Ontology::RelationshipI) -
perl(Bio::Ontology::RelationshipType) -
perl(Bio::Ontology::SimpleGOEngine::GraphAdaptor) -
perl(Bio::Ontology::SimpleOntologyEngine) -
perl(Bio::Ontology::Term) -
perl(Bio::Ontology::TermFactory) -
perl(Bio::Ontology::TermI) -
perl(Bio::OntologyIO) -
perl(Bio::OntologyIO::Handlers::BaseSAXHandler) -
perl(Bio::OntologyIO::Handlers::InterProHandler) -
perl(Bio::OntologyIO::Handlers::InterPro_BioSQL_Handler) -
perl(Bio::OntologyIO::InterProParser) -
perl(Bio::OntologyIO::dagflat) -
perl(Bio::OntologyIO::goflat) -
perl(Bio::OntologyIO::obo) -
perl(Bio::OntologyIO::simplehierarchy) -
perl(Bio::OntologyIO::soflat) -
perl(Bio::ParameterBaseI) -
perl(Bio::Perl) -
perl(Bio::Phenotype::Correlate) -
perl(Bio::Phenotype::MeSH::Term) -
perl(Bio::Phenotype::MeSH::Twig) -
perl(Bio::Phenotype::Measure) -
perl(Bio::Phenotype::OMIM::MiniMIMentry) -
perl(Bio::Phenotype::OMIM::OMIMentry) -
perl(Bio::Phenotype::OMIM::OMIMentryAllelicVariant) -
perl(Bio::Phenotype::OMIM::OMIMparser) -
perl(Bio::Phenotype::Phenotype) -
perl(Bio::Phenotype::PhenotypeI) -
perl(Bio::PhyloNetwork) -
perl(Bio::PhyloNetwork::Factory) -
perl(Bio::PhyloNetwork::FactoryX) -
perl(Bio::PhyloNetwork::GraphViz) -
perl(Bio::PhyloNetwork::RandomFactory) -
perl(Bio::PhyloNetwork::TreeFactory) -
perl(Bio::PhyloNetwork::TreeFactoryMulti) -
perl(Bio::PhyloNetwork::TreeFactoryX) -
perl(Bio::PhyloNetwork::muVector) -
perl(Bio::PopGen::Genotype) -
perl(Bio::PopGen::GenotypeI) -
perl(Bio::PopGen::HtSNP) -
perl(Bio::PopGen::IO) -
perl(Bio::PopGen::IO::csv) -
perl(Bio::PopGen::IO::hapmap) -
perl(Bio::PopGen::IO::phase) -
perl(Bio::PopGen::IO::prettybase) -
perl(Bio::PopGen::Individual) -
perl(Bio::PopGen::IndividualI) -
perl(Bio::PopGen::Marker) -
perl(Bio::PopGen::MarkerI) -
perl(Bio::PopGen::PopStats) -
perl(Bio::PopGen::Population) -
perl(Bio::PopGen::PopulationI) -
perl(Bio::PopGen::Simulation::Coalescent) -
perl(Bio::PopGen::Simulation::GeneticDrift) -
perl(Bio::PopGen::Statistics) -
perl(Bio::PopGen::TagHaplotype) -
perl(Bio::PopGen::Utilities) -
perl(Bio::PrimarySeq) -
perl(Bio::PrimarySeq::Fasta) -
perl(Bio::PrimarySeqI) -
perl(Bio::PullParserI) -
perl(Bio::Range) -
perl(Bio::RangeI) -
perl(Bio::Restriction::Analysis) -
perl(Bio::Restriction::Enzyme) -
perl(Bio::Restriction::Enzyme::MultiCut) -
perl(Bio::Restriction::Enzyme::MultiSite) -
perl(Bio::Restriction::EnzymeCollection) -
perl(Bio::Restriction::EnzymeI) -
perl(Bio::Restriction::IO) -
perl(Bio::Restriction::IO::bairoch) -
perl(Bio::Restriction::IO::base) -
perl(Bio::Restriction::IO::itype2) -
perl(Bio::Restriction::IO::prototype) -
perl(Bio::Restriction::IO::withrefm) -
perl(Bio::Root::Build) == 1.6.924
perl(Bio::Root::Exception) -
perl(Bio::Root::HTTPget) -
perl(Bio::Root::IO) -
perl(Bio::Root::Root) -
perl(Bio::Root::RootI) -
perl(Bio::Root::Storable) -
perl(Bio::Root::Test) -
perl(Bio::Root::Utilities) -
perl(Bio::Root::Version) == 1.6.924
perl(Bio::Search::BlastStatistics) -
perl(Bio::Search::BlastUtils) -
perl(Bio::Search::DatabaseI) -
perl(Bio::Search::GenericDatabase) -
perl(Bio::Search::GenericStatistics) -
perl(Bio::Search::HSP::BlastHSP) -
perl(Bio::Search::HSP::BlastPullHSP) -
perl(Bio::Search::HSP::FastaHSP) -
perl(Bio::Search::HSP::GenericHSP) -
perl(Bio::Search::HSP::HMMERHSP) -
perl(Bio::Search::HSP::HSPFactory) -
perl(Bio::Search::HSP::HSPI) -
perl(Bio::Search::HSP::HmmpfamHSP) -
perl(Bio::Search::HSP::ModelHSP) -
perl(Bio::Search::HSP::PSLHSP) -
perl(Bio::Search::HSP::PsiBlastHSP) -
perl(Bio::Search::HSP::PullHSPI) -
perl(Bio::Search::HSP::WABAHSP) -
perl(Bio::Search::Hit::BlastHit) -
perl(Bio::Search::Hit::BlastPullHit) -
perl(Bio::Search::Hit::Fasta) -
perl(Bio::Search::Hit::GenericHit) -
perl(Bio::Search::Hit::HMMERHit) -
perl(Bio::Search::Hit::HitFactory) -
perl(Bio::Search::Hit::HitI) -
perl(Bio::Search::Hit::HmmpfamHit) -
perl(Bio::Search::Hit::ModelHit) -
perl(Bio::Search::Hit::PsiBlastHit) -
perl(Bio::Search::Hit::PullHitI) -
perl(Bio::Search::Hit::hmmer3Hit) -
perl(Bio::Search::Iteration::GenericIteration) -
perl(Bio::Search::Iteration::IterationI) -
perl(Bio::Search::Processor) -
perl(Bio::Search::Result::BlastPullResult) -
perl(Bio::Search::Result::BlastResult) -
perl(Bio::Search::Result::CrossMatchResult) -
perl(Bio::Search::Result::GenericResult) -
perl(Bio::Search::Result::HMMERResult) -
perl(Bio::Search::Result::HmmpfamResult) -
perl(Bio::Search::Result::PullResultI) -
perl(Bio::Search::Result::ResultFactory) -
perl(Bio::Search::Result::ResultI) -
perl(Bio::Search::Result::WABAResult) -
perl(Bio::Search::Result::hmmer3Result) -
perl(Bio::Search::SearchUtils) -
perl(Bio::Search::StatisticsI) -
perl(Bio::Search::Tiling::MapTileUtils) -
perl(Bio::Search::Tiling::MapTiling) -
perl(Bio::Search::Tiling::TilingI) -
perl(Bio::SearchDist) -
perl(Bio::SearchIO) -
perl(Bio::SearchIO::EventHandlerI) -
perl(Bio::SearchIO::FastHitEventBuilder) -
perl(Bio::SearchIO::IteratedSearchResultEventBuilder) -
perl(Bio::SearchIO::SearchResultEventBuilder) -
perl(Bio::SearchIO::SearchWriterI) -
perl(Bio::SearchIO::Writer::BSMLResultWriter) -
perl(Bio::SearchIO::Writer::GbrowseGFF) -
perl(Bio::SearchIO::Writer::HSPTableWriter) -
perl(Bio::SearchIO::Writer::HTMLResultWriter) -
perl(Bio::SearchIO::Writer::HitTableWriter) -
perl(Bio::SearchIO::Writer::ResultTableWriter) -
perl(Bio::SearchIO::Writer::TextResultWriter) -
perl(Bio::SearchIO::XML::BlastHandler) -
perl(Bio::SearchIO::XML::PsiBlastHandler) -
perl(Bio::SearchIO::axt) -
perl(Bio::SearchIO::blast) -
perl(Bio::SearchIO::blast_pull) -
perl(Bio::SearchIO::blasttable) -
perl(Bio::SearchIO::blastxml) -
perl(Bio::SearchIO::cross_match) -
perl(Bio::SearchIO::erpin) -
perl(Bio::SearchIO::exonerate) -
perl(Bio::SearchIO::fasta) -
perl(Bio::SearchIO::gmap_f9) -
perl(Bio::SearchIO::hmmer) -
perl(Bio::SearchIO::hmmer2) -
perl(Bio::SearchIO::hmmer3) -
perl(Bio::SearchIO::hmmer_pull) -
perl(Bio::SearchIO::infernal) -
perl(Bio::SearchIO::megablast) -
perl(Bio::SearchIO::psl) -
perl(Bio::SearchIO::rnamotif) -
perl(Bio::SearchIO::sim4) -
perl(Bio::SearchIO::waba) -
perl(Bio::SearchIO::wise) -
perl(Bio::Seq) -
perl(Bio::Seq::BaseSeqProcessor) -
perl(Bio::Seq::EncodedSeq) -
perl(Bio::Seq::LargeLocatableSeq) -
perl(Bio::Seq::LargePrimarySeq) -
perl(Bio::Seq::LargeSeq) -
perl(Bio::Seq::LargeSeqI) -
perl(Bio::Seq::Meta) -
perl(Bio::Seq::Meta::Array) -
perl(Bio::Seq::MetaI) -
perl(Bio::Seq::PrimaryQual) -
perl(Bio::Seq::PrimaryQual::Qual) -
perl(Bio::Seq::PrimedSeq) -
perl(Bio::Seq::QualI) -
perl(Bio::Seq::Quality) -
perl(Bio::Seq::RichSeq) -
perl(Bio::Seq::RichSeqI) -
perl(Bio::Seq::SeqBuilder) -
perl(Bio::Seq::SeqFactory) -
perl(Bio::Seq::SeqFastaSpeedFactory) -
perl(Bio::Seq::SeqWithQuality) -
perl(Bio::Seq::SequenceTrace) -
perl(Bio::Seq::SimulatedRead) -
perl(Bio::Seq::TraceI) -
perl(Bio::SeqAnalysisParserI) -
perl(Bio::SeqEvolution::DNAPoint) -
perl(Bio::SeqEvolution::EvolutionI) -
perl(Bio::SeqEvolution::Factory) -
perl(Bio::SeqFeature::Amplicon) -
perl(Bio::SeqFeature::AnnotationAdaptor) -
perl(Bio::SeqFeature::Collection) -
perl(Bio::SeqFeature::CollectionI) -
perl(Bio::SeqFeature::Computation) -
perl(Bio::SeqFeature::FeaturePair) -
perl(Bio::SeqFeature::Gene::Exon) -
perl(Bio::SeqFeature::Gene::ExonI) -
perl(Bio::SeqFeature::Gene::GeneStructure) -
perl(Bio::SeqFeature::Gene::GeneStructureI) -
perl(Bio::SeqFeature::Gene::Intron) -
perl(Bio::SeqFeature::Gene::NC_Feature) -
perl(Bio::SeqFeature::Gene::Poly_A_site) -
perl(Bio::SeqFeature::Gene::Promoter) -
perl(Bio::SeqFeature::Gene::Transcript) -
perl(Bio::SeqFeature::Gene::TranscriptI) -
perl(Bio::SeqFeature::Gene::UTR) -
perl(Bio::SeqFeature::Generic) -
perl(Bio::SeqFeature::Lite) -
perl(Bio::SeqFeature::PositionProxy) -
perl(Bio::SeqFeature::Primer) -
perl(Bio::SeqFeature::SiRNA::Oligo) -
perl(Bio::SeqFeature::SiRNA::Pair) -
perl(Bio::SeqFeature::Similarity) -
perl(Bio::SeqFeature::SimilarityPair) -
perl(Bio::SeqFeature::SubSeq) -
perl(Bio::SeqFeature::Tools::FeatureNamer) -
perl(Bio::SeqFeature::Tools::IDHandler) -
perl(Bio::SeqFeature::Tools::TypeMapper) -
perl(Bio::SeqFeature::Tools::Unflattener) -
perl(Bio::SeqFeature::TypedSeqFeatureI) -
perl(Bio::SeqFeatureI) -
perl(Bio::SeqI) -
perl(Bio::SeqIO) -
perl(Bio::SeqIO::FTHelper) -
perl(Bio::SeqIO::Handler::GenericRichSeqHandler) -
perl(Bio::SeqIO::MultiFile) -
perl(Bio::SeqIO::abi) -
perl(Bio::SeqIO::ace) -
perl(Bio::SeqIO::agave) -
perl(Bio::SeqIO::alf) -
perl(Bio::SeqIO::asciitree) -
perl(Bio::SeqIO::bsml) -
perl(Bio::SeqIO::bsml_sax) -
perl(Bio::SeqIO::chadoxml) -
perl(Bio::SeqIO::chaos) -
perl(Bio::SeqIO::chaosxml) -
perl(Bio::SeqIO::ctf) -
perl(Bio::SeqIO::embl) -
perl(Bio::SeqIO::embldriver) -
perl(Bio::SeqIO::entrezgene) -
perl(Bio::SeqIO::excel) -
perl(Bio::SeqIO::exp) -
perl(Bio::SeqIO::fasta) -
perl(Bio::SeqIO::fastq) -
perl(Bio::SeqIO::flybase_chadoxml) -
perl(Bio::SeqIO::game) -
perl(Bio::SeqIO::game::featHandler) -
perl(Bio::SeqIO::game::gameHandler) -
perl(Bio::SeqIO::game::gameSubs) -
perl(Bio::SeqIO::game::gameWriter) -
perl(Bio::SeqIO::game::seqHandler) -
perl(Bio::SeqIO::gbdriver) -
perl(Bio::SeqIO::gbxml) -
perl(Bio::SeqIO::gcg) -
perl(Bio::SeqIO::genbank) -
perl(Bio::SeqIO::interpro) -
perl(Bio::SeqIO::kegg) -
perl(Bio::SeqIO::largefasta) -
perl(Bio::SeqIO::lasergene) -
perl(Bio::SeqIO::locuslink) -
perl(Bio::SeqIO::mbsout) -
perl(Bio::SeqIO::metafasta) -
perl(Bio::SeqIO::msout) -
perl(Bio::SeqIO::nexml) -
perl(Bio::SeqIO::phd) -
perl(Bio::SeqIO::pir) -
perl(Bio::SeqIO::pln) -
perl(Bio::SeqIO::qual) -
perl(Bio::SeqIO::raw) -
perl(Bio::SeqIO::scf) -
perl(Bio::SeqIO::seqxml) -
perl(Bio::SeqIO::strider) -
perl(Bio::SeqIO::swiss) -
perl(Bio::SeqIO::swissdriver) -
perl(Bio::SeqIO::tab) -
perl(Bio::SeqIO::table) -
perl(Bio::SeqIO::tigr) -
perl(Bio::SeqIO::tigrxml) -
perl(Bio::SeqIO::tinyseq) -
perl(Bio::SeqIO::tinyseq::tinyseqHandler) -
perl(Bio::SeqIO::ztr) -
perl(Bio::SeqUtils) -
perl(Bio::SimpleAlign) -
perl(Bio::SimpleAnalysisI) -
perl(Bio::Species) -
perl(Bio::Structure::Atom) -
perl(Bio::Structure::Chain) -
perl(Bio::Structure::Entry) -
perl(Bio::Structure::IO) -
perl(Bio::Structure::IO::pdb) -
perl(Bio::Structure::Model) -
perl(Bio::Structure::Residue) -
perl(Bio::Structure::SecStr::DSSP::Res) -
perl(Bio::Structure::SecStr::STRIDE::Res) -
perl(Bio::Structure::StructureI) -
perl(Bio::Symbol::Alphabet) -
perl(Bio::Symbol::AlphabetI) -
perl(Bio::Symbol::DNAAlphabet) -
perl(Bio::Symbol::ProteinAlphabet) -
perl(Bio::Symbol::Symbol) -
perl(Bio::Symbol::SymbolI) -
perl(Bio::Taxon) -
perl(Bio::Taxonomy) -
perl(Bio::Taxonomy::FactoryI) -
perl(Bio::Taxonomy::Node) -
perl(Bio::Taxonomy::Taxon) -
perl(Bio::Taxonomy::Tree) -
perl(Bio::Tools::AlignFactory) -
perl(Bio::Tools::Alignment::Consed) -
perl(Bio::Tools::Alignment::Trim) -
perl(Bio::Tools::AmpliconSearch) -
perl(Bio::Tools::Analysis::DNA::ESEfinder) -
perl(Bio::Tools::Analysis::Protein::Domcut) -
perl(Bio::Tools::Analysis::Protein::ELM) -
perl(Bio::Tools::Analysis::Protein::GOR4) -
perl(Bio::Tools::Analysis::Protein::HNN) -
perl(Bio::Tools::Analysis::Protein::Mitoprot) -
perl(Bio::Tools::Analysis::Protein::NetPhos) -
perl(Bio::Tools::Analysis::Protein::Scansite) -
perl(Bio::Tools::Analysis::Protein::Sopma) -
perl(Bio::Tools::Analysis::SimpleAnalysisBase) -
perl(Bio::Tools::AnalysisResult) -
perl(Bio::Tools::Blat) -
perl(Bio::Tools::CodonTable) -
perl(Bio::Tools::Coil) -
perl(Bio::Tools::ECnumber) -
perl(Bio::Tools::EMBOSS::Palindrome) -
perl(Bio::Tools::EPCR) -
perl(Bio::Tools::ERPIN) -
perl(Bio::Tools::ESTScan) -
perl(Bio::Tools::Eponine) -
perl(Bio::Tools::Est2Genome) -
perl(Bio::Tools::Fgenesh) -
perl(Bio::Tools::FootPrinter) -
perl(Bio::Tools::GFF) -
perl(Bio::Tools::Gel) -
perl(Bio::Tools::Geneid) -
perl(Bio::Tools::Genemark) -
perl(Bio::Tools::Genewise) -
perl(Bio::Tools::Genomewise) -
perl(Bio::Tools::Genscan) -
perl(Bio::Tools::Glimmer) -
perl(Bio::Tools::Grail) -
perl(Bio::Tools::GuessSeqFormat) -
perl(Bio::Tools::HMMER::Domain) -
perl(Bio::Tools::HMMER::Results) -
perl(Bio::Tools::HMMER::Set) -
perl(Bio::Tools::Hmmpfam) -
perl(Bio::Tools::IUPAC) -
perl(Bio::Tools::Infernal) -
perl(Bio::Tools::Lucy) -
perl(Bio::Tools::MZEF) -
perl(Bio::Tools::Match) -
perl(Bio::Tools::OddCodes) -
perl(Bio::Tools::Phylo::Gerp) -
perl(Bio::Tools::Phylo::Gumby) -
perl(Bio::Tools::Phylo::Molphy) -
perl(Bio::Tools::Phylo::Molphy::Result) -
perl(Bio::Tools::Phylo::PAML) -
perl(Bio::Tools::Phylo::PAML::Codeml) -
perl(Bio::Tools::Phylo::PAML::ModelResult) -
perl(Bio::Tools::Phylo::PAML::Result) -
perl(Bio::Tools::Phylo::Phylip::ProtDist) -
perl(Bio::Tools::Prediction::Exon) -
perl(Bio::Tools::Prediction::Gene) -
perl(Bio::Tools::Primer3) -
perl(Bio::Tools::Primer::Assessor::Base) -
perl(Bio::Tools::Primer::AssessorI) -
perl(Bio::Tools::Primer::Feature) -
perl(Bio::Tools::Primer::Pair) -
perl(Bio::Tools::Prints) -
perl(Bio::Tools::Profile) -
perl(Bio::Tools::Promoterwise) -
perl(Bio::Tools::PrositeScan) -
perl(Bio::Tools::Protparam) -
perl(Bio::Tools::Pseudowise) -
perl(Bio::Tools::QRNA) -
perl(Bio::Tools::RNAMotif) -
perl(Bio::Tools::RandomDistFunctions) -
perl(Bio::Tools::RepeatMasker) -
perl(Bio::Tools::Run::GenericParameters) -
perl(Bio::Tools::Run::ParametersI) -
perl(Bio::Tools::Run::RemoteBlast) -
perl(Bio::Tools::Run::StandAloneBlast) -
perl(Bio::Tools::Run::StandAloneNCBIBlast) -
perl(Bio::Tools::Run::StandAloneWUBlast) -
perl(Bio::Tools::Run::WrapperBase) -
perl(Bio::Tools::Seg) -
perl(Bio::Tools::SeqPattern) -
perl(Bio::Tools::SeqPattern::Backtranslate) -
perl(Bio::Tools::SeqStats) -
perl(Bio::Tools::SeqWords) -
perl(Bio::Tools::SiRNA) -
perl(Bio::Tools::SiRNA::Ruleset::saigo) -
perl(Bio::Tools::SiRNA::Ruleset::tuschl) -
perl(Bio::Tools::Sigcleave) -
perl(Bio::Tools::Signalp) -
perl(Bio::Tools::Signalp::ExtendedSignalp) -
perl(Bio::Tools::Sim4::Exon) -
perl(Bio::Tools::Sim4::Results) -
perl(Bio::Tools::Spidey::Exon) -
perl(Bio::Tools::Spidey::Results) -
perl(Bio::Tools::TandemRepeatsFinder) -
perl(Bio::Tools::TargetP) -
perl(Bio::Tools::Tmhmm) -
perl(Bio::Tools::dpAlign) -
perl(Bio::Tools::ipcress) -
perl(Bio::Tools::isPcr) -
perl(Bio::Tools::pICalculator) -
perl(Bio::Tools::pSW) -
perl(Bio::Tools::tRNAscanSE) -
perl(Bio::Tree::AlleleNode) -
perl(Bio::Tree::AnnotatableNode) -
perl(Bio::Tree::Compatible) -
perl(Bio::Tree::DistanceFactory) -
perl(Bio::Tree::Draw::Cladogram) -
perl(Bio::Tree::Node) -
perl(Bio::Tree::NodeI) -
perl(Bio::Tree::NodeNHX) -
perl(Bio::Tree::RandomFactory) -
perl(Bio::Tree::Statistics) -
perl(Bio::Tree::Tree) -
perl(Bio::Tree::TreeFunctionsI) -
perl(Bio::Tree::TreeI) -
perl(Bio::TreeIO) -
perl(Bio::TreeIO::NewickParser) -
perl(Bio::TreeIO::TreeEventBuilder) -
perl(Bio::TreeIO::cluster) -
perl(Bio::TreeIO::lintree) -
perl(Bio::TreeIO::newick) -
perl(Bio::TreeIO::nexml) -
perl(Bio::TreeIO::nexus) -
perl(Bio::TreeIO::nhx) -
perl(Bio::TreeIO::pag) -
perl(Bio::TreeIO::phyloxml) -
perl(Bio::TreeIO::svggraph) -
perl(Bio::TreeIO::tabtree) -
perl(Bio::UpdateableSeqI) -
perl(Bio::Variation::AAChange) -
perl(Bio::Variation::AAReverseMutate) -
perl(Bio::Variation::Allele) -
perl(Bio::Variation::DNAMutation) -
perl(Bio::Variation::IO) -
perl(Bio::Variation::IO::flat) -
perl(Bio::Variation::IO::xml) -
perl(Bio::Variation::RNAChange) -
perl(Bio::Variation::SNP) -
perl(Bio::Variation::SeqDiff) -
perl(Bio::Variation::VariantI) -
perl(Bio::WebAgent) -
perl(FeatureStore) -
perl-BioPerl == 1.6.924-10.mga6
perl-bioperl -

Obsoletes

Name Value
perl-bioperl <= 1.6.901

Download

Type URL
Binary Package perl-BioPerl-1.6.924-10.mga6.noarch.rpm
Source Package perl-BioPerl-1.6.924-10.mga6.src.rpm

Install Howto

  1. Enable Mageia Core repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install perl-BioPerl rpm package:
    # urpmi perl-BioPerl

Files

Path
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnalysisI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnalysisParserI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnalysisResultI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnnotatableI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnnotationCollectionI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AnnotationI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/ClusterI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/ClusterIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DBLinkContainerI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DasI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DescribableI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/FeatureHolderI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/HandlerBaseI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/IdCollectionI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/IdentifiableI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/LocatableSeq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/LocationI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/MapIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/NexmlIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/OntologyIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/ParameterBaseI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Perl.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/PhyloNetwork.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/PrimarySeq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/PrimarySeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/PullParserI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Range.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/RangeI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SearchDist.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SearchIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Seq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SeqAnalysisParserI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SeqFeatureI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SeqIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SeqUtils.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SimpleAlign.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/SimpleAnalysisI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Species.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Taxon.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Taxonomy.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/TreeIO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/UpdateableSeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/WebAgent.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/AlignI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/DNAStatistics.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/Graphics.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/PairwiseStatistics.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/ProteinStatistics.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/StatisticsI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Align/Utilities.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/arp.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/bl2seq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/clustalw.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/emboss.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/fasta.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/largemultifasta.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/maf.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/mase.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/mega.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/meme.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/metafasta.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/msf.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/nexml.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/nexus.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/pfam.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/phylip.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/po.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/proda.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/prodom.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/psi.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/selex.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/stockholm.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/xmfa.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/AlignIO/Handler/GenericAlignHandler.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/AnnotationFactory.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Collection.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Comment.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/DBLink.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/OntologyTerm.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Reference.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Relation.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/SimpleValue.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/StructuredValue.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/TagTree.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Target.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/Tree.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Annotation/TypeManager.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/Contig.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/ContigAnalysis.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/Scaffold.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/ScaffoldI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/Singlet.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/ace.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/bowtie.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/maq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/phrap.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/sam.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/IO/tigr.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Assembly/Tools/ContigSpectrum.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Cluster/ClusterFactory.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Cluster/FamilyI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Cluster/SequenceFamily.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Cluster/UniGene.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Cluster/UniGeneI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/ClusterIO/dbsnp.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/ClusterIO/unigene.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/CodonUsage/IO.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/CodonUsage/Table.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Chain.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Collection.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/ExtrapolatingPair.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/GeneMapper.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Graph.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/MapperI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Pair.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Result.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/ResultI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Utils.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Result/Gap.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/Coordinate/Result/Match.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Ace.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/BioFetch.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/CUTG.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/DBFetch.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/EMBL.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/EntrezGene.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Expression.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Failover.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Fasta.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/FileCache.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GenBank.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GenPept.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GenericWebAgent.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/HIV.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/InMemoryCache.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/IndexedBase.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/LocationI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/MeSH.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/NCBIHelper.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Qual.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/QueryI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/RandomAccessI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/RefSeq.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/ReferenceI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Registry.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/SeqFeature.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/SeqHound.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/SeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/SeqVersion.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/SwissProt.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/TFBS.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Taxonomy.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Universal.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/UpdateableSeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/WebDBSeqI.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Expression/geo.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BDB.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BinarySearch.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BDB/embl.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BDB/fasta.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BDB/genbank.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/Flat/BDB/swiss.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Aggregator.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Featname.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Feature.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Homol.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/RelSegment.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Segment.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Typename.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/ace.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/berkeleydb.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/biofetch.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/biofetch_oracle.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/memory.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/iterator.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/mysql.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/mysqlace.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/oracle.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/oracleace.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/pg.pm
/usr/lib/perl5/vendor_perl/5.22.2/Bio/DB/GFF/Adaptor/dbi/pg_fts.pm
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/usr/share/man/man3/Bio::TreeIO::lintree.3pm.xz
/usr/share/man/man3/Bio::TreeIO::newick.3pm.xz
/usr/share/man/man3/Bio::TreeIO::nexml.3pm.xz
/usr/share/man/man3/Bio::TreeIO::nexus.3pm.xz
/usr/share/man/man3/Bio::TreeIO::nhx.3pm.xz
/usr/share/man/man3/Bio::TreeIO::pag.3pm.xz
/usr/share/man/man3/Bio::TreeIO::phyloxml.3pm.xz
/usr/share/man/man3/Bio::TreeIO::svggraph.3pm.xz
/usr/share/man/man3/Bio::TreeIO::tabtree.3pm.xz
/usr/share/man/man3/Bio::UpdateableSeqI.3pm.xz
/usr/share/man/man3/Bio::Variation::AAChange.3pm.xz
/usr/share/man/man3/Bio::Variation::AAReverseMutate.3pm.xz
/usr/share/man/man3/Bio::Variation::Allele.3pm.xz
/usr/share/man/man3/Bio::Variation::DNAMutation.3pm.xz
/usr/share/man/man3/Bio::Variation::IO.3pm.xz
/usr/share/man/man3/Bio::Variation::IO::flat.3pm.xz
/usr/share/man/man3/Bio::Variation::IO::xml.3pm.xz
/usr/share/man/man3/Bio::Variation::RNAChange.3pm.xz
/usr/share/man/man3/Bio::Variation::SNP.3pm.xz
/usr/share/man/man3/Bio::Variation::SeqDiff.3pm.xz
/usr/share/man/man3/Bio::Variation::VariantI.3pm.xz
/usr/share/man/man3/Bio::WebAgent.3pm.xz

Changelog

2016-06-18 - pterjan <pterjan> 1.6.924-10.mga6
+ Revision: 1022729
- Rebuild for perl 5.22.2
2016-02-08 - umeabot <umeabot> 1.6.924-9.mga6
+ Revision: 950849
- Mageia 6 Mass Rebuild
2014-11-25 - sander85 <sander85> 1.6.924-8.mga5
+ Revision: 798908
- Remove Bio::SeqFeature::Annotated from exclusion list
2014-11-25 - sander85 <sander85> 1.6.924-7.mga5
+ Revision: 798897
- Temporarily exclude Bio::SeqFeature::Annotated
2014-11-25 - sander85 <sander85> 1.6.924-6.mga5
+ Revision: 798893
- Exclude deprecated modules
2014-10-23 - danf <danf> 1.6.924-5.mga5
+ Revision: 792836
- Stop adding requires and provides from examples
2014-10-18 - umeabot <umeabot> 1.6.924-4.mga5
+ Revision: 788272
- Rebuild to potentially add missing dependencies
2014-10-15 - umeabot <umeabot> 1.6.924-3.mga5
+ Revision: 750988
- Second Mageia 5 Mass Rebuild
2014-09-16 - umeabot <umeabot> 1.6.924-2.mga5
+ Revision: 683605
- Mageia 5 Mass Rebuild
+ tv <tv>
- use %global for req/prov exclude
- autoconvert to new prov/req excludes
2014-07-11 - sander85 <sander85> 1.6.924-1.mga5
+ Revision: 651277
- update to 1.6.924

See Also

Package Description
perl-BioPerl-Run-1.6.900-8.mga6.noarch.rpm BioPerl wrappers for external programs
perl-Bit-Vector-7.400.0-4.mga6.x86_64.rpm Bit-Vector module for perl
perl-Boost-Geometry-Utils-0.150.0-10.mga6.x86_64.rpm Bindings for the Boost Geometry library
perl-Bot-BasicBot-0.890.0-7.mga6.noarch.rpm A simple IRC bot base class
perl-Bot-BasicBot-Pluggable-0.980.0-8.mga6.noarch.rpm Extension to the simple irc bot base class allowing for pluggable modules
perl-Bot-BasicBot-Pluggable-Module-Tea-0.10.0-8.mga6.noarch.rpm Organise tea rounds via IRC
perl-Browser-Open-0.40.0-7.mga6.noarch.rpm Open a browser in a given URL
perl-Business-CreditCard-0.350.0-2.mga6.noarch.rpm Credit card number check digit test
perl-Business-Hours-0.120.0-7.mga6.noarch.rpm Calculate business hours in a time period
perl-Business-ISBN-2.10.0-2.mga6.noarch.rpm Work with International Standard Book Numbers
perl-Business-ISBN-Data-20140910.3.0-2.mga6.noarch.rpm Data pack for Business::ISBN
perl-Business-PayPal-0.170.0-4.mga6.noarch.rpm Perl extension for automating PayPal transactions
perl-Bytes-Random-Secure-0.290.0-3.mga6.noarch.rpm Cryptographically suitable random bytes
perl-C-Analyzer-0.20.0-7.mga6.noarch.rpm Generates C Call Control Flow tree for C source code
perl-CACertOrg-CA-20110724.4.0-5.mga6.noarch.rpm CACert.org's CA root certificate in PEM format
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